Viewing Structures
This tutorial covers the basics of viewing atomic structures in ACoord.
Opening a Structure File
- Open a supported file in VS Code (
.cif,.xyz,POSCAR, etc.) - Click the ACoord Structure Editor icon in the editor title bar
- Or right-click → Reopen with → ACoord Structure Editor
Navigation Controls
| Action | Control |
|---|---|
| Rotate | Left-click and drag |
| Pan | Right-click and drag |
| Zoom | Scroll wheel |
| Reset | Click Reset button in toolbar |
Display Settings
Atom Size
- Open the Size & Style panel
- Use the Atoms radius slider to adjust selected atoms
- Click Reset to element default or Set to covalent radius for defaults
Bond Thickness
- Open the Size & Style panel
- Use the Bond thickness slider
Color Scheme
- Open the Colors panel
- Select a color scheme from the dropdown
- Select atoms in the 3D view
- Click Apply in the Brush panel (left toolbar)
Lighting
- Open the Lighting panel
- Adjust Ambient, Key, Fill, or Rim lights
Selection
Select Single Atom
- Click directly on an atom
Multi-Select
- Hold Ctrl/Cmd and click multiple atoms
Box Select
- Ensure Select tool is active (press
V) - Click and drag in empty space
- Release to select atoms inside box
- Hold Ctrl/Cmd while releasing to add to selection
- Hold Alt while releasing to subtract from selection
Deselect
- Click in empty space or press Esc
Measuring Bonds
- Select two atoms (Ctrl/Cmd+click both)
- Distance displays in the Properties panel
